This is the updated list from a previous blog:

Saesee Tiin (Ikotchi)- By Sidious on Coruscant
Agen Kolar (Zabrak)- By Sidious on Coruscant
Kit Fisto (Nautolan)- By Sidious on Coruscant
Mace Windu (Human)- By Sidious on Coruscant
Jurrokk (Unknown)- By Vader on Coruscant
Shaak Ti (Togruta) - By Vader on Coruscant (Presumed, for now)
Cin Drallig (Human)- By Vader on Coruscant
Bene (Human)- By Vader on Coruscant
Whie (Human) - By Vader on Coruscant
Jocasta Nu (Human) - By Vader on Coruscant
Ki-Adi-Mundi (Cerean) - By Commander Bacara on Mygeeto
Aayla Secura (Twi'lek) - By Commander Bly on Felucia
Barriss Offee (Mirialan) - By Lieutenant Galle on Felucia
Luminara Unduli (Mirialan) - On Kashyyyk
Plo Koon (Kel Dor) - Killed by Jag on Cato Neimoidia
Stass Allie (Human)- By Commander Neyo on Saleucami
Serra Keto (Human) - Killed by Darth Vader
Master Simms (Human) - On Toola

Killed right after Order 66:

Dama Montalvo (Human) - By Vader on Coruscant
Sia-Lan Wezz (Human) - By Vader on Kessel
Ma'Kis' Shaalas (Nikto) - By Vader on Kessel
Shadday (Human)- By Vader on Kessel
Bultar Swan (Human)- By Koffi Arana on Kessel
Koffi Arana (Human)- By Vader on Kessel
Roblio Darte (Human)- By Clones on Kessel
Jastus Farr (Unknown)- By Clones on Kessel
Tsui Choi (Aleena)- By Clones on Kessel
Unknown Human Jedi- By Clones on Coruscant
Bol Chatak (Zabrak)- By Vader on Murkhana
Roan Shryne (Human)- By Vader on Kashyyyk

Definite Survivors:

Yoda
Obi-Wan (Human)
Quinlan Vos (Kiffar)
The Dark Woman (Human)
Zao (Veknoid)
Olee Starstone (Human)
Klossi Anno (Human)
Deran Nalual (Togruta)
Jambe Lu (Human)
Nam Poorf (Human)
Unknown Verpine Jedi
Unknown Human Female Jedi
Vergere (Fosh)
Vima-da-Boda (Human)
Empatojayos Brand (Human)
Jerec (Miraluka)
Sarris (Human)
Maw (Boltrunian)
Boc (Twi'lek)
Ferus Olin (Human)
Ekria (Human)
Zonder (Selonian)
Drake Lo'gaan (Human)
K'Kruhk (Whiphid)
A'Sharad Hett (Tusken)
Tremayne (Human)
Echuu Shen-Jon (Human)
Kai Hudorra (Bothan)
Dass Jennir (Human)
Jeisel (Devaronian)
Noirah Na (Human)
T'ra Saa (Neti)
Tholme (Human)
Kai Justiss (Human)
Ydra Kilwallen (Human)
Halagad Ventor (Human)
Qu Rahn (Human)
Garen Muln (Human)
Kam Solusar (Human)

Possible Survivors:

Coleman Kcaj (Ongree)
Even Piell (Lannik)
Voolvif Monn (Shistavenen)
Scout (Human)
Ylenic It'kla (Caamasi)
Depa Billaba (Still in a coma) (Chalactan)